STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH30680.1Succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase. (454 aa)    
Predicted Functional Partners:
SDH10259.1
Glutamate synthase (NADH) large subunit.
  
 
 0.894
SDH30820.1
PTS system, sucrose-specific IIC component.
   
 
 0.858
SDH54602.1
PTS system N-acetylglucosamine-specific IIA component, Glc family /PTS system N-acetylglucosamine-specific IIB component, Glc family.
   
 
 0.858
SDH92941.1
2-oxoglutarate dehydrogenase E1 component.
   
 
 0.839
fumC
Fumarase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
    
  0.832
mqo
Malate dehydrogenase (quinone).
   
 
  0.817
SDH79033.1
Succinate dehydrogenase subunit B; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
   
 
  0.813
SDH79113.1
Succinate dehydrogenase subunit C.
   
 
  0.807
pckG
Phosphoenolpyruvate carboxykinase (GTP); Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle; Belongs to the phosphoenolpyruvate carboxykinase [GTP] family.
   
 
  0.803
SDH31114.1
Isocitrate dehydrogenase; Belongs to the monomeric-type IDH family.
   
 
  0.803
Your Current Organism:
Agrococcus jejuensis
NCBI taxonomy Id: 399736
Other names: A. jejuensis, Agrococcus jejuensis Lee 2008, DSM 22002, JCM 14256, KCTC 19198, strain SSW1-48
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