STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH31188.1Putative glucoamylase. (533 aa)    
Predicted Functional Partners:
SDH31290.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
     0.937
SDH31152.1
Beta-glucosidase.
 
    0.864
SDH31272.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
     0.836
SDH31231.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
     0.819
SDH31330.1
Transcriptional regulator, LacI family.
 
     0.697
SDH69286.1
Winged helix DNA-binding domain-containing protein.
  
     0.547
SDH89894.1
Dipeptidase E; Belongs to the peptidase S51 family.
  
     0.446
SDH61250.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
     0.430
SDH60782.1
Extracellular solute-binding protein.
 
     0.402
Your Current Organism:
Agrococcus jejuensis
NCBI taxonomy Id: 399736
Other names: A. jejuensis, Agrococcus jejuensis Lee 2008, DSM 22002, JCM 14256, KCTC 19198, strain SSW1-48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.