STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH31777.1Putative tricarboxylic transport membrane protein. (343 aa)    
Predicted Functional Partners:
SDH31857.1
Putative tricarboxylic transport membrane protein.
 
  
 0.977
SDH31815.1
Putative tricarboxylic transport membrane protein.
 
  
 0.972
SDH54797.1
Putative tricarboxylic transport membrane protein.
 
  
 0.906
SDH63140.1
TctA family transporter.
 
  
 0.906
SDH54833.1
Putative tricarboxylic transport membrane protein.
 
  
 0.834
SDH63103.1
Tripartite tricarboxylate transporter TctB family protein.
 
  
 0.790
SDH31735.1
Two-component system, CitB family, sensor kinase.
 
    0.669
SDH31692.1
Response regulator of citrate/malate metabolism.
 
    0.649
Your Current Organism:
Agrococcus jejuensis
NCBI taxonomy Id: 399736
Other names: A. jejuensis, Agrococcus jejuensis Lee 2008, DSM 22002, JCM 14256, KCTC 19198, strain SSW1-48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.