STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH36029.1Hypothetical protein. (558 aa)    
Predicted Functional Partners:
SDH35938.1
Hypothetical protein.
       0.787
SDH36067.1
Hypothetical protein.
       0.784
SDH35986.1
Hypothetical protein.
       0.773
SDH68700.1
Hypothetical protein.
  
     0.737
SDH36918.1
Hypothetical protein.
 
     0.694
SDH51769.1
Hypothetical protein.
  
     0.694
SDH65449.1
Hypothetical protein.
  
     0.652
SDH23293.1
Uncharacterized conserved protein, contains ParB-like and HNH nuclease domains.
  
     0.635
SDH70172.1
Protein of unknown function.
  
     0.615
SDH98631.1
Hypothetical protein.
  
     0.612
Your Current Organism:
Agrococcus jejuensis
NCBI taxonomy Id: 399736
Other names: A. jejuensis, Agrococcus jejuensis Lee 2008, DSM 22002, JCM 14256, KCTC 19198, strain SSW1-48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.