STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH37878.1Putrescine oxidase. (465 aa)    
Predicted Functional Partners:
SDH37843.1
Amino acid transporter.
 
   
 0.929
SDH88774.1
Helicase conserved C-terminal domain-containing protein.
    
 0.925
SDH50852.1
Phytoene desaturase.
   
 
0.921
SDH60953.1
Agmatinase; Belongs to the arginase family.
 
  
 0.916
SDH26860.1
N-carbamoylputrescine amidase.
  
 
 0.903
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
     
 0.867
SDH31577.1
Glutamate or tyrosine decarboxylase.
    
 0.865
SDH24321.1
Hypothetical protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
    
 0.864
SDH93372.1
Aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family.
     
 0.860
SDH47391.1
Saccharopine dehydrogenase, NADP-dependent.
   
 
  0.841
Your Current Organism:
Agrococcus jejuensis
NCBI taxonomy Id: 399736
Other names: A. jejuensis, Agrococcus jejuensis Lee 2008, DSM 22002, JCM 14256, KCTC 19198, strain SSW1-48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.