STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH38394.1Hypothetical protein. (949 aa)    
Predicted Functional Partners:
SDH38360.1
Hypothetical protein.
 
     0.943
ribA
GTP cyclohydrolase II /3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the GTP cyclohydrolase II family. In the N-terminal section; belongs to the DHBP synthase family.
    
  0.862
SDH38320.1
AAA+-type ATPase, SpoVK/Ycf46/Vps4 family.
 
     0.842
SDH38717.1
Type VII secretion integral membrane protein EccD.
 
     0.730
SDH38676.1
Type VII secretion protein EccB.
 
     0.709
SDH38176.1
Hypothetical protein.
  
     0.653
SDH38417.1
Transferase hexapeptide (six repeat-containing protein).
 
     0.635
SDH81364.1
Glycosyl transferases group 1.
  
     0.589
SDH39300.1
Dihydroneopterin aldolase/dihydropteroate synthase,TIGR01496; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.
     
 0.562
SDH38251.1
Hsp70 protein; Belongs to the heat shock protein 70 family.
  
   
 0.550
Your Current Organism:
Agrococcus jejuensis
NCBI taxonomy Id: 399736
Other names: A. jejuensis, Agrococcus jejuensis Lee 2008, DSM 22002, JCM 14256, KCTC 19198, strain SSW1-48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.