STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH38441.1Proteins of 100 residues with WXG; Belongs to the WXG100 family. (105 aa)    
Predicted Functional Partners:
SDH38475.1
YbaB/EbfC DNA-binding family protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC family.
       0.773
SDH38527.1
Hypothetical protein.
       0.773
SDH38566.1
Hypothetical protein.
       0.631
SDH38417.1
Transferase hexapeptide (six repeat-containing protein).
       0.588
SDH38605.1
Hypothetical protein.
       0.487
SDH38640.1
Hypothetical protein.
       0.436
SDH38394.1
Hypothetical protein.
       0.433
SDH38320.1
AAA+-type ATPase, SpoVK/Ycf46/Vps4 family.
       0.431
SDH38360.1
Hypothetical protein.
       0.431
Your Current Organism:
Agrococcus jejuensis
NCBI taxonomy Id: 399736
Other names: A. jejuensis, Agrococcus jejuensis Lee 2008, DSM 22002, JCM 14256, KCTC 19198, strain SSW1-48
Server load: medium (62%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.