STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH38751.1DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family. (1326 aa)    
Predicted Functional Partners:
SDH38781.1
Subtilase family protein.
 
 
 0.982
SDH38717.1
Type VII secretion integral membrane protein EccD.
 
 
 0.974
SDH38676.1
Type VII secretion protein EccB.
 
 
 0.951
SDH30026.1
WXG100 family type VII secretion target; Belongs to the WXG100 family.
   
 
 0.928
SDH38527.1
Hypothetical protein.
 
 
   0.800
SDH17660.1
Cell division protein FtsQ.
   
 
 0.727
SDH36107.1
Proteins of 100 residues with WXG; Belongs to the WXG100 family.
   
   0.722
SDH36303.1
Proteins of 100 residues with WXG.
   
   0.722
SDH38360.1
Hypothetical protein.
 
    0.605
SDH42977.1
CshA-type fibril repeat-containing protein.
  
 
   0.571
Your Current Organism:
Agrococcus jejuensis
NCBI taxonomy Id: 399736
Other names: A. jejuensis, Agrococcus jejuensis Lee 2008, DSM 22002, JCM 14256, KCTC 19198, strain SSW1-48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.