STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH42365.1MFS transporter, MHS family, proline/betaine transporter. (470 aa)    
Predicted Functional Partners:
SDH42431.1
Glyoxylase, beta-lactamase superfamily II.
       0.752
SDH42468.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
       0.599
SDH42504.1
3-hydroxyisobutyrate dehydrogenase.
       0.599
SDH42540.1
Cupin domain-containing protein.
       0.599
SDH42573.1
4-carboxymuconolactone decarboxylase.
       0.599
SDH42610.1
3-hydroxyisobutyrate dehydrogenase.
       0.599
SDH42647.1
Type I secretion C-terminal target domain (VC_A0849 subclass).
       0.599
SDH42335.1
Predicted arabinose efflux permease, MFS family.
 
  
 
0.577
SDH42303.1
Alcohol dehydrogenase.
       0.459
SDH42675.1
Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family.
       0.400
Your Current Organism:
Agrococcus jejuensis
NCBI taxonomy Id: 399736
Other names: A. jejuensis, Agrococcus jejuensis Lee 2008, DSM 22002, JCM 14256, KCTC 19198, strain SSW1-48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.