STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH45241.1Glycolate oxidase. (488 aa)    
Predicted Functional Partners:
SDH62122.1
Catalase; Belongs to the catalase family.
   
 0.831
SDH92874.1
Malate synthase; Belongs to the malate synthase family.
  
 
 0.823
SDH33565.1
Phosphoglycolate phosphatase.
    
 0.809
SDH43185.1
2-keto-3-deoxy-phosphogluconate aldolase.
   
 
 0.807
SDH92888.1
Isocitrate lyase.
     
 0.801
SDH10259.1
Glutamate synthase (NADH) large subunit.
    
 0.794
SDH46692.1
L-lactate dehydrogenase (cytochrome).
   
 0.787
SDH57272.1
Glycolate oxidase.
   
 0.787
SDI00483.1
Menaquinol-cytochrome c reductase cytochrome c1 subunit precursor.
    
  0.768
SDH10204.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
    
 0.751
Your Current Organism:
Agrococcus jejuensis
NCBI taxonomy Id: 399736
Other names: A. jejuensis, Agrococcus jejuensis Lee 2008, DSM 22002, JCM 14256, KCTC 19198, strain SSW1-48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.