Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SDH10626.1 | SDH46627.1 | SAMN04489720_0055 | SAMN04489720_1342 | 16S rRNA (cytosine967-C5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | Fructose-1,6-bisphosphatase. | 0.772 |
| SDH10626.1 | SDH74496.1 | SAMN04489720_0055 | SAMN04489720_2229 | 16S rRNA (cytosine967-C5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | Phospholipase_D-nuclease N-terminal. | 0.867 |
| SDH10626.1 | nusA | SAMN04489720_0055 | SAMN04489720_0501 | 16S rRNA (cytosine967-C5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | NusA antitermination factor; Participates in both transcription termination and antitermination. | 0.867 |
| SDH10626.1 | nusG | SAMN04489720_0055 | SAMN04489720_2283 | 16S rRNA (cytosine967-C5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | Transcription antitermination protein nusG; Participates in transcription elongation, termination and antitermination. | 0.756 |
| SDH10626.1 | rpoB | SAMN04489720_0055 | SAMN04489720_1064 | 16S rRNA (cytosine967-C5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.949 |
| SDH10626.1 | rpoC | SAMN04489720_0055 | SAMN04489720_1063 | 16S rRNA (cytosine967-C5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.864 |
| SDH10626.1 | rpoZ | SAMN04489720_0055 | SAMN04489720_0060 | 16S rRNA (cytosine967-C5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.978 |
| SDH46627.1 | SDH10626.1 | SAMN04489720_1342 | SAMN04489720_0055 | Fructose-1,6-bisphosphatase. | 16S rRNA (cytosine967-C5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.772 |
| SDH46627.1 | SDH46652.1 | SAMN04489720_1342 | SAMN04489720_1343 | Fructose-1,6-bisphosphatase. | Methyltransferase domain-containing protein. | 0.773 |
| SDH46627.1 | SDH74496.1 | SAMN04489720_1342 | SAMN04489720_2229 | Fructose-1,6-bisphosphatase. | Phospholipase_D-nuclease N-terminal. | 0.753 |
| SDH46627.1 | SDH85155.1 | SAMN04489720_1342 | SAMN04489720_2602 | Fructose-1,6-bisphosphatase. | Predicted dehydrogenase. | 0.744 |
| SDH46627.1 | SDH85181.1 | SAMN04489720_1342 | SAMN04489720_2603 | Fructose-1,6-bisphosphatase. | Predicted dehydrogenase. | 0.744 |
| SDH46627.1 | nusA | SAMN04489720_1342 | SAMN04489720_0501 | Fructose-1,6-bisphosphatase. | NusA antitermination factor; Participates in both transcription termination and antitermination. | 0.753 |
| SDH46627.1 | nusG | SAMN04489720_1342 | SAMN04489720_2283 | Fructose-1,6-bisphosphatase. | Transcription antitermination protein nusG; Participates in transcription elongation, termination and antitermination. | 0.769 |
| SDH46627.1 | rpoB | SAMN04489720_1342 | SAMN04489720_1064 | Fructose-1,6-bisphosphatase. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.786 |
| SDH46627.1 | rpoC | SAMN04489720_1342 | SAMN04489720_1063 | Fructose-1,6-bisphosphatase. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.786 |
| SDH46627.1 | rpoZ | SAMN04489720_1342 | SAMN04489720_0060 | Fructose-1,6-bisphosphatase. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.788 |
| SDH46652.1 | SDH46627.1 | SAMN04489720_1343 | SAMN04489720_1342 | Methyltransferase domain-containing protein. | Fructose-1,6-bisphosphatase. | 0.773 |
| SDH74496.1 | SDH10626.1 | SAMN04489720_2229 | SAMN04489720_0055 | Phospholipase_D-nuclease N-terminal. | 16S rRNA (cytosine967-C5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.867 |
| SDH74496.1 | SDH46627.1 | SAMN04489720_2229 | SAMN04489720_1342 | Phospholipase_D-nuclease N-terminal. | Fructose-1,6-bisphosphatase. | 0.753 |
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