STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH46926.1Hypothetical protein. (94 aa)    
Predicted Functional Partners:
SDH46949.1
Polyketide cyclase / dehydrase and lipid transport.
       0.625
SDH97316.1
Protein of unknown function.
  
     0.559
SDH83847.1
HNH endonuclease.
  
     0.556
SDH99483.1
Protein of unknown function.
  
     0.529
SDH13247.1
HNH endonuclease.
  
     0.517
SDH17215.1
HNH endonuclease.
  
     0.492
SDH28555.1
HNH endonuclease.
  
     0.488
SDH29459.1
Regulatory protein, tetR family.
  
     0.487
SDH91696.1
HNH endonuclease.
  
     0.484
SDH63526.1
Uncharacterized HhH-GPD family protein.
  
     0.468
Your Current Organism:
Agrococcus jejuensis
NCBI taxonomy Id: 399736
Other names: A. jejuensis, Agrococcus jejuensis Lee 2008, DSM 22002, JCM 14256, KCTC 19198, strain SSW1-48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.