STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH47358.1Hypothetical protein. (218 aa)    
Predicted Functional Partners:
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
    
  0.825
SDH47330.1
Predicted kinase.
       0.773
SDH68700.1
Hypothetical protein.
  
     0.585
SDH33527.1
Hypothetical protein.
  
     0.522
SDH16849.1
FemAB family protein.
  
     0.514
SDH64713.1
N-acetylglutamate synthase, GNAT family.
  
     0.506
SDH16783.1
Acetyltransferase (GNAT) domain-containing protein.
  
     0.504
SDH89894.1
Dipeptidase E; Belongs to the peptidase S51 family.
  
     0.501
SDH16814.1
FemAB family protein.
  
     0.500
SDH16024.1
Uncharacterized conserved protein YndB, AHSA1/START domain.
  
     0.488
Your Current Organism:
Agrococcus jejuensis
NCBI taxonomy Id: 399736
Other names: A. jejuensis, Agrococcus jejuensis Lee 2008, DSM 22002, JCM 14256, KCTC 19198, strain SSW1-48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.