STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH48135.13-hydroxyacyl-CoA dehydrogenase. (301 aa)    
Predicted Functional Partners:
SDH48054.1
Thiolase, C-terminal domain; Belongs to the thiolase-like superfamily. Thiolase family.
 0.997
SDH48095.1
Enoyl-CoA hydratase/carnithine racemase.
 0.995
SDH71191.1
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 0.994
SDH18920.1
acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 0.992
SDH12126.1
acetyl-CoA acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 0.987
SDH29361.1
acetyl-CoA acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 0.984
SDH14379.1
Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.974
SDH48881.1
Enoyl-CoA hydratase/carnithine racemase.
 0.968
SDH57605.1
glutaryl-CoA dehydrogenase.
 
 0.935
SDH99317.1
Acyl-CoA dehydrogenase.
 
 0.924
Your Current Organism:
Agrococcus jejuensis
NCBI taxonomy Id: 399736
Other names: A. jejuensis, Agrococcus jejuensis Lee 2008, DSM 22002, JCM 14256, KCTC 19198, strain SSW1-48
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