STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH50019.1PPOX class probable F420-dependent enzyme. (135 aa)    
Predicted Functional Partners:
SDH49984.1
Glycerate kinase; Belongs to the glycerate kinase type-1 family.
       0.746
SDH69263.1
Deazaflavin-dependent oxidoreductase, nitroreductase family.
  
     0.684
SDH52168.1
Deazaflavin-dependent oxidoreductase, nitroreductase family.
  
   
 0.649
SDH54073.1
Protein of unknown function.
  
     0.645
SDH49925.1
Amino acid transporter.
       0.547
SDH49952.1
Hypothetical protein.
       0.547
SDH59938.1
CsbD-like.
 
    0.545
SDH59784.1
CsbD-like; Belongs to the UPF0337 (CsbD) family.
 
    0.542
SDH95420.1
Probable F420-dependent oxidoreductase, Rv1855c family.
  
     0.539
SDH47263.1
Hypothetical protein.
  
     0.493
Your Current Organism:
Agrococcus jejuensis
NCBI taxonomy Id: 399736
Other names: A. jejuensis, Agrococcus jejuensis Lee 2008, DSM 22002, JCM 14256, KCTC 19198, strain SSW1-48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.