STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH50194.1PTS system IIC component, L-Asc family. (502 aa)    
Predicted Functional Partners:
SDH50123.1
PTS system, ascorbate-specific IIA component.
 
 
  0.998
SDH50160.1
PTS system IIB component, L-Asc family.
 
 
 0.998
SDH99551.1
Transcriptional antiterminator, BglG family.
 
 
 0.907
SDH99681.1
PTS system, ascorbate-specific IIA component.
 
 
  0.883
SDH80111.1
PTS system IIA component, L-Asc family.
 
 
  0.880
SDH34018.1
Phosphocarrier protein HPr.
    
 0.868
SDH99658.1
PTS system, ascorbate-specific IIB component.
 
 
 0.864
SDH80142.1
PTS system IIB component, L-Asc family.
  
 
 0.812
SDH78656.1
Riboflavin synthase alpha chain.
   
    0.671
rpmE2
LSU ribosomal protein L31P.
   
    0.671
Your Current Organism:
Agrococcus jejuensis
NCBI taxonomy Id: 399736
Other names: A. jejuensis, Agrococcus jejuensis Lee 2008, DSM 22002, JCM 14256, KCTC 19198, strain SSW1-48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.