Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDH10259.1 | SDH30312.1 | SAMN04489720_0042 | SAMN04489720_0822 | Glutamate synthase (NADH) large subunit. | Phosphate uptake regulator, PhoU; Plays a role in the regulation of phosphate uptake. | 0.683 |
SDH10259.1 | SDH51566.1 | SAMN04489720_0042 | SAMN04489720_1483 | Glutamate synthase (NADH) large subunit. | Uncharacterized conserved protein YaeQ, suppresses RfaH defect. | 0.670 |
SDH30312.1 | SDH10259.1 | SAMN04489720_0822 | SAMN04489720_0042 | Phosphate uptake regulator, PhoU; Plays a role in the regulation of phosphate uptake. | Glutamate synthase (NADH) large subunit. | 0.683 |
SDH30312.1 | SDH51566.1 | SAMN04489720_0822 | SAMN04489720_1483 | Phosphate uptake regulator, PhoU; Plays a role in the regulation of phosphate uptake. | Uncharacterized conserved protein YaeQ, suppresses RfaH defect. | 0.688 |
SDH30312.1 | kduI | SAMN04489720_0822 | SAMN04489720_1247 | Phosphate uptake regulator, PhoU; Plays a role in the regulation of phosphate uptake. | 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family. | 0.645 |
SDH51482.1 | SDH51522.1 | SAMN04489720_1481 | SAMN04489720_1482 | Hypothetical protein. | Hypothetical protein. | 0.527 |
SDH51482.1 | SDH51566.1 | SAMN04489720_1481 | SAMN04489720_1483 | Hypothetical protein. | Uncharacterized conserved protein YaeQ, suppresses RfaH defect. | 0.460 |
SDH51482.1 | SDH51595.1 | SAMN04489720_1481 | SAMN04489720_1484 | Hypothetical protein. | Predicted arabinose efflux permease, MFS family. | 0.460 |
SDH51522.1 | SDH51482.1 | SAMN04489720_1482 | SAMN04489720_1481 | Hypothetical protein. | Hypothetical protein. | 0.527 |
SDH51522.1 | SDH51566.1 | SAMN04489720_1482 | SAMN04489720_1483 | Hypothetical protein. | Uncharacterized conserved protein YaeQ, suppresses RfaH defect. | 0.664 |
SDH51522.1 | SDH51595.1 | SAMN04489720_1482 | SAMN04489720_1484 | Hypothetical protein. | Predicted arabinose efflux permease, MFS family. | 0.664 |
SDH51566.1 | SDH10259.1 | SAMN04489720_1483 | SAMN04489720_0042 | Uncharacterized conserved protein YaeQ, suppresses RfaH defect. | Glutamate synthase (NADH) large subunit. | 0.670 |
SDH51566.1 | SDH30312.1 | SAMN04489720_1483 | SAMN04489720_0822 | Uncharacterized conserved protein YaeQ, suppresses RfaH defect. | Phosphate uptake regulator, PhoU; Plays a role in the regulation of phosphate uptake. | 0.688 |
SDH51566.1 | SDH51482.1 | SAMN04489720_1483 | SAMN04489720_1481 | Uncharacterized conserved protein YaeQ, suppresses RfaH defect. | Hypothetical protein. | 0.460 |
SDH51566.1 | SDH51522.1 | SAMN04489720_1483 | SAMN04489720_1482 | Uncharacterized conserved protein YaeQ, suppresses RfaH defect. | Hypothetical protein. | 0.664 |
SDH51566.1 | SDH51595.1 | SAMN04489720_1483 | SAMN04489720_1484 | Uncharacterized conserved protein YaeQ, suppresses RfaH defect. | Predicted arabinose efflux permease, MFS family. | 0.773 |
SDH51566.1 | SDH65834.1 | SAMN04489720_1483 | SAMN04489720_1918 | Uncharacterized conserved protein YaeQ, suppresses RfaH defect. | DNA-binding transcriptional regulator, AcrR family. | 0.718 |
SDH51566.1 | SDH87420.1 | SAMN04489720_1483 | SAMN04489720_2685 | Uncharacterized conserved protein YaeQ, suppresses RfaH defect. | DNA-binding transcriptional regulator YbjK. | 0.669 |
SDH51566.1 | kduI | SAMN04489720_1483 | SAMN04489720_1247 | Uncharacterized conserved protein YaeQ, suppresses RfaH defect. | 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family. | 0.717 |
SDH51595.1 | SDH51482.1 | SAMN04489720_1484 | SAMN04489720_1481 | Predicted arabinose efflux permease, MFS family. | Hypothetical protein. | 0.460 |
page 1 of 2