STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH51857.1ABC-type Mn2+/Zn2+ transport system, permease component. (279 aa)    
Predicted Functional Partners:
SDH51916.1
Manganese/iron transport system ATP-binding protein; Manually curated.
 
 0.998
SDH51952.1
Zinc/manganese transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family.
 
 0.996
SDH51823.1
Zinc uptake regulator, Fur family; Belongs to the Fur family.
  
  
 0.874
SDH51895.1
Manganese/iron transport system permease protein.
 
  
 
0.805
map-3
Methionyl aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.
       0.773
SDH91649.1
Iron (metal) dependent repressor, DtxR family.
 
 
 0.537
SDH51769.1
Hypothetical protein.
       0.533
rpmB
LSU ribosomal protein L28P; Belongs to the bacterial ribosomal protein bL28 family.
     
 0.530
SDH09668.1
Mn2+ and Fe2+ transporters of the NRAMP family.
   
  
 0.524
SDH67998.1
Manganese transport protein.
   
  
 0.524
Your Current Organism:
Agrococcus jejuensis
NCBI taxonomy Id: 399736
Other names: A. jejuensis, Agrococcus jejuensis Lee 2008, DSM 22002, JCM 14256, KCTC 19198, strain SSW1-48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.