STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH52643.1Alpha,alpha-trehalase. (501 aa)    
Predicted Functional Partners:
SDH29497.1
Predicted trehalose synthase.
   
 
 0.897
SDH52608.1
NADPH:quinone reductase.
  
    0.779
SDH62122.1
Catalase; Belongs to the catalase family.
   
  
 0.731
SDH57731.1
Alpha,alpha-trehalose phosphorylase.
   
 0.642
SDH52671.1
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase).
       0.550
SDH40484.1
Maltooligosyl trehalose hydrolase.
  
 
 0.547
SDH52700.1
Pyruvate dehydrogenase E1 component beta subunit.
       0.546
SDH52735.1
Pyruvate dehydrogenase E1 component alpha subunit.
       0.546
SDH52771.1
Histidinol-phosphate aminotransferase.
       0.546
SDH52534.1
Transketolase subunit B.
       0.516
Your Current Organism:
Agrococcus jejuensis
NCBI taxonomy Id: 399736
Other names: A. jejuensis, Agrococcus jejuensis Lee 2008, DSM 22002, JCM 14256, KCTC 19198, strain SSW1-48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.