Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SDH42610.1 | SDH55886.1 | SAMN04489720_1224 | SAMN04489720_1611 | 3-hydroxyisobutyrate dehydrogenase. | Uncharacterized conserved protein YgbK, DUF1537 family. | 0.878 |
| SDH45637.1 | SDH55886.1 | SAMN04489720_1314 | SAMN04489720_1611 | 3-hydroxyisobutyrate dehydrogenase. | Uncharacterized conserved protein YgbK, DUF1537 family. | 0.942 |
| SDH45637.1 | SDH79649.1 | SAMN04489720_1314 | SAMN04489720_2419 | 3-hydroxyisobutyrate dehydrogenase. | Fructose-bisphosphate aldolase, class II. | 0.755 |
| SDH45637.1 | SDH99594.1 | SAMN04489720_1314 | SAMN04489720_3135 | 3-hydroxyisobutyrate dehydrogenase. | Fructose-bisphosphate aldolase. | 0.880 |
| SDH55735.1 | SDH55773.1 | SAMN04489720_1607 | SAMN04489720_1608 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 6-phosphogluconate dehydrogenase (decarboxylating). | 0.779 |
| SDH55735.1 | SDH55840.1 | SAMN04489720_1607 | SAMN04489720_1610 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Predicted nucleic acid-binding protein, contains Zn-ribbon domain (includes truncated derivatives). | 0.854 |
| SDH55735.1 | SDH55886.1 | SAMN04489720_1607 | SAMN04489720_1611 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Uncharacterized conserved protein YgbK, DUF1537 family. | 0.505 |
| SDH55735.1 | recF | SAMN04489720_1607 | SAMN04489720_1609 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family. | 0.983 |
| SDH55773.1 | SDH55735.1 | SAMN04489720_1608 | SAMN04489720_1607 | 6-phosphogluconate dehydrogenase (decarboxylating). | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.779 |
| SDH55773.1 | SDH55840.1 | SAMN04489720_1608 | SAMN04489720_1610 | 6-phosphogluconate dehydrogenase (decarboxylating). | Predicted nucleic acid-binding protein, contains Zn-ribbon domain (includes truncated derivatives). | 0.857 |
| SDH55773.1 | SDH55886.1 | SAMN04489720_1608 | SAMN04489720_1611 | 6-phosphogluconate dehydrogenase (decarboxylating). | Uncharacterized conserved protein YgbK, DUF1537 family. | 0.537 |
| SDH55773.1 | recF | SAMN04489720_1608 | SAMN04489720_1609 | 6-phosphogluconate dehydrogenase (decarboxylating). | DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family. | 0.843 |
| SDH55840.1 | SDH55735.1 | SAMN04489720_1610 | SAMN04489720_1607 | Predicted nucleic acid-binding protein, contains Zn-ribbon domain (includes truncated derivatives). | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.854 |
| SDH55840.1 | SDH55773.1 | SAMN04489720_1610 | SAMN04489720_1608 | Predicted nucleic acid-binding protein, contains Zn-ribbon domain (includes truncated derivatives). | 6-phosphogluconate dehydrogenase (decarboxylating). | 0.857 |
| SDH55840.1 | SDH55886.1 | SAMN04489720_1610 | SAMN04489720_1611 | Predicted nucleic acid-binding protein, contains Zn-ribbon domain (includes truncated derivatives). | Uncharacterized conserved protein YgbK, DUF1537 family. | 0.558 |
| SDH55840.1 | recF | SAMN04489720_1610 | SAMN04489720_1609 | Predicted nucleic acid-binding protein, contains Zn-ribbon domain (includes truncated derivatives). | DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family. | 0.879 |
| SDH55886.1 | SDH42610.1 | SAMN04489720_1611 | SAMN04489720_1224 | Uncharacterized conserved protein YgbK, DUF1537 family. | 3-hydroxyisobutyrate dehydrogenase. | 0.878 |
| SDH55886.1 | SDH45637.1 | SAMN04489720_1611 | SAMN04489720_1314 | Uncharacterized conserved protein YgbK, DUF1537 family. | 3-hydroxyisobutyrate dehydrogenase. | 0.942 |
| SDH55886.1 | SDH55735.1 | SAMN04489720_1611 | SAMN04489720_1607 | Uncharacterized conserved protein YgbK, DUF1537 family. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.505 |
| SDH55886.1 | SDH55773.1 | SAMN04489720_1611 | SAMN04489720_1608 | Uncharacterized conserved protein YgbK, DUF1537 family. | 6-phosphogluconate dehydrogenase (decarboxylating). | 0.537 |
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