STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH56730.1FHA domain-containing protein. (188 aa)    
Predicted Functional Partners:
SDH56556.1
Serine/threonine protein kinase.
 
 
 
 0.987
SDH56767.1
FHA domain-containing protein.
 
   
 0.985
SDH92941.1
2-oxoglutarate dehydrogenase E1 component.
    
 
 0.984
SDH18156.1
Serine/threonine protein kinase.
 
 
 
 0.961
SDH56591.1
Serine/threonine protein kinase.
 
 
 
 0.957
SDH56631.1
Cell elongation-specific peptidoglycan D,D-transpeptidase.
 
   
 0.937
SDH56693.1
Protein phosphatase.
 
  
 0.916
SDH56662.1
Cell division protein FtsW, lipid II flippase; Belongs to the SEDS family.
 
   
 0.903
SDH79708.1
Membrane carboxypeptidase (penicillin-binding protein).
   
 0.802
SDH55240.1
Putative peptidoglycan lipid II flippase.
  
 
   0.781
Your Current Organism:
Agrococcus jejuensis
NCBI taxonomy Id: 399736
Other names: A. jejuensis, Agrococcus jejuensis Lee 2008, DSM 22002, JCM 14256, KCTC 19198, strain SSW1-48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.