STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH58093.1L-aminopeptidase/D-esterase. (354 aa)    
Predicted Functional Partners:
SDH57924.1
ABC-type transport system, substrate-binding protein.
 
     0.812
SDH58061.1
Oligopeptide transport system ATP-binding protein.
       0.785
SDH57993.1
Peptide/nickel transport system permease protein.
  
    0.782
SDH57957.1
Peptide/nickel transport system permease protein.
  
    0.781
SDH58022.1
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component.
       0.776
SDH58122.1
Negative transcriptional regulator, PaiB family.
       0.773
SDH58160.1
isopenicillin-N N-acyltransferase like protein.
       0.773
SDH58199.1
isopenicillin-N N-acyltransferase like protein.
 
     0.510
SDH57899.1
DNA-binding transcriptional regulator, LacI/PurR family.
       0.477
Your Current Organism:
Agrococcus jejuensis
NCBI taxonomy Id: 399736
Other names: A. jejuensis, Agrococcus jejuensis Lee 2008, DSM 22002, JCM 14256, KCTC 19198, strain SSW1-48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.