STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH59091.1NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. (261 aa)    
Predicted Functional Partners:
SDH10259.1
Glutamate synthase (NADH) large subunit.
     
 0.873
SDH30820.1
PTS system, sucrose-specific IIC component.
     
 0.811
SDH54602.1
PTS system N-acetylglucosamine-specific IIA component, Glc family /PTS system N-acetylglucosamine-specific IIB component, Glc family.
     
 0.811
SDH59001.1
2,4-dienoyl-CoA reductase.
    
  0.790
SDH13941.1
3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 
 0.789
SDH59032.1
Glutamate carboxypeptidase.
   
   0.784
SDH59066.1
2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.
       0.773
SDH59118.1
MFS transporter, MHS family, alpha-ketoglutarate permease.
       0.773
SDH13860.1
[acyl-carrier-protein] S-malonyltransferase.
  0.761
SDH48795.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
   
  0.708
Your Current Organism:
Agrococcus jejuensis
NCBI taxonomy Id: 399736
Other names: A. jejuensis, Agrococcus jejuensis Lee 2008, DSM 22002, JCM 14256, KCTC 19198, strain SSW1-48
Server load: medium (64%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.