STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH60153.1Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family. (623 aa)    
Predicted Functional Partners:
SDH40484.1
Maltooligosyl trehalose hydrolase.
 
 
 0.946
SDH29497.1
Predicted trehalose synthase.
 
 
 0.941
SDH62621.1
Maltose alpha-D-glucosyltransferase/ alpha-amylase.
 
  
 0.893
SDH57731.1
Alpha,alpha-trehalose phosphorylase.
     
 0.889
SDH75245.1
Alpha-glucosidase.
    
 0.842
SDH60189.1
Hypothetical protein.
 
     0.819
SDH40664.1
Maltooligosyl trehalose synthase.
 
  
 0.809
SDH60127.1
Hypothetical protein.
       0.773
glgE
Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB.
 
  
 0.628
SDH60352.1
Glycosyl transferase family 2.
       0.537
Your Current Organism:
Agrococcus jejuensis
NCBI taxonomy Id: 399736
Other names: A. jejuensis, Agrococcus jejuensis Lee 2008, DSM 22002, JCM 14256, KCTC 19198, strain SSW1-48
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