STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH60443.1Hypothetical protein. (115 aa)    
Predicted Functional Partners:
SDH60412.1
Hypothetical protein.
       0.768
SDI03592.1
Hypothetical protein.
  
     0.761
SDH38895.1
Hypothetical protein.
  
     0.683
SDH24935.1
Hypothetical protein.
  
     0.670
SDH82290.1
Hypothetical protein.
  
     0.666
SDH24381.1
Protein of unknown function.
  
     0.662
SDH10401.1
Hypothetical protein.
  
     0.657
SDH29724.1
Hypothetical protein.
  
     0.643
SDH22735.1
Probable phosphoglycerate mutase.
  
     0.641
SDH84829.1
Hypothetical protein.
  
     0.641
Your Current Organism:
Agrococcus jejuensis
NCBI taxonomy Id: 399736
Other names: A. jejuensis, Agrococcus jejuensis Lee 2008, DSM 22002, JCM 14256, KCTC 19198, strain SSW1-48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.