STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH60820.1DNA-binding transcriptional regulator, Lrp family. (297 aa)    
Predicted Functional Partners:
SDH60923.1
Acetolactate synthase-1/2/3 large subunit; Belongs to the TPP enzyme family.
 
 
  0.645
SDH60953.1
Agmatinase; Belongs to the arginase family.
 
     0.624
SDH30820.1
PTS system, sucrose-specific IIC component.
   
 
  0.597
SDH54602.1
PTS system N-acetylglucosamine-specific IIA component, Glc family /PTS system N-acetylglucosamine-specific IIB component, Glc family.
   
 
  0.597
SDH60889.1
Hypothetical protein.
 
     0.555
SDH13359.1
Glycine/D-amino acid oxidase.
  
     0.527
SDH25738.1
Glycine/D-amino acid oxidase.
  
     0.508
SDH60857.1
Sugar phosphate permease.
       0.487
SDH24321.1
Hypothetical protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
     0.474
SDH60782.1
Extracellular solute-binding protein.
       0.437
Your Current Organism:
Agrococcus jejuensis
NCBI taxonomy Id: 399736
Other names: A. jejuensis, Agrococcus jejuensis Lee 2008, DSM 22002, JCM 14256, KCTC 19198, strain SSW1-48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.