STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH61250.1Carbohydrate ABC transporter substrate-binding protein, CUT1 family. (410 aa)    
Predicted Functional Partners:
SDH61191.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
 0.993
SDH61218.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
  0.987
SDH30115.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
  
 0.971
SDH85090.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
 0.946
SDH31231.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
 0.931
SDH62434.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
 0.914
SDH98734.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
 0.914
SDH85124.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
 0.913
SDH30785.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
 0.911
SDH61278.1
DNA-binding transcriptional regulator, LacI/PurR family.
 
     0.880
Your Current Organism:
Agrococcus jejuensis
NCBI taxonomy Id: 399736
Other names: A. jejuensis, Agrococcus jejuensis Lee 2008, DSM 22002, JCM 14256, KCTC 19198, strain SSW1-48
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