STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH61278.1DNA-binding transcriptional regulator, LacI/PurR family. (336 aa)    
Predicted Functional Partners:
SDH61250.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
     0.880
SDH10259.1
Glutamate synthase (NADH) large subunit.
    
 
 0.863
SDH61218.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
     0.862
SDH30820.1
PTS system, sucrose-specific IIC component.
    
 0.854
SDH54602.1
PTS system N-acetylglucosamine-specific IIA component, Glc family /PTS system N-acetylglucosamine-specific IIB component, Glc family.
    
 0.854
SDH61191.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
     0.815
SDH34018.1
Phosphocarrier protein HPr.
    
   0.707
SDI00674.1
Phosphocarrier protein HPr /dihydroxyacetone kinase DhaM subunit.
   
   0.707
ribA
GTP cyclohydrolase II /3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the GTP cyclohydrolase II family. In the N-terminal section; belongs to the DHBP synthase family.
    
   0.706
SDH61317.1
Glycogen debranching enzyme (alpha-1,6-glucosidase).
 
     0.661
Your Current Organism:
Agrococcus jejuensis
NCBI taxonomy Id: 399736
Other names: A. jejuensis, Agrococcus jejuensis Lee 2008, DSM 22002, JCM 14256, KCTC 19198, strain SSW1-48
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.