STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH62494.1Carbohydrate ABC transporter substrate-binding protein, CUT1 family. (453 aa)    
Predicted Functional Partners:
SDH62434.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
 0.999
SDH62460.1
ABC-type sugar transport system, permease component.
 
  0.995
SDH30115.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
  
 0.986
SDH85090.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
  
 0.950
SDH31231.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  
 0.918
SDH61191.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  
 0.918
SDH30785.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  
 0.836
SDH85124.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  
 0.836
SDH98734.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  
 0.836
SDH75192.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
  
  0.714
Your Current Organism:
Agrococcus jejuensis
NCBI taxonomy Id: 399736
Other names: A. jejuensis, Agrococcus jejuensis Lee 2008, DSM 22002, JCM 14256, KCTC 19198, strain SSW1-48
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