STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH64904.1Phytoene dehydrogenase-related protein. (523 aa)    
Predicted Functional Partners:
SDH50889.1
Phytoene/squalene synthetase.
  
 
 0.838
SDH50852.1
Phytoene desaturase.
  
 
 0.743
SDH64934.1
L-proline dehydrogenase.
  
 
 0.596
SDH64870.1
Hypothetical protein.
       0.498
SDH64809.1
Immunity protein 47.
       0.470
SDH64842.1
Hypothetical protein.
       0.470
SDH95508.1
Predicted arabinose efflux permease, MFS family.
  
     0.444
SDH85474.1
Pimeloyl-ACP methyl ester carboxylesterase.
  
    0.440
SDH18061.1
Geranylgeranyl diphosphate synthase, type I; Belongs to the FPP/GGPP synthase family.
  
 
 0.432
SDH67121.1
Short chain dehydrogenase.
  
     0.422
Your Current Organism:
Agrococcus jejuensis
NCBI taxonomy Id: 399736
Other names: A. jejuensis, Agrococcus jejuensis Lee 2008, DSM 22002, JCM 14256, KCTC 19198, strain SSW1-48
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