STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH65569.1LPXTG-motif cell wall anchor domain-containing protein/conserved repeat domain-containing protein. (1286 aa)    
Predicted Functional Partners:
SDH65635.1
RNA polymerase sigma factor, sigma-70 family; Belongs to the sigma-70 factor family. ECF subfamily.
 
 
  0.734
SDH27550.1
SipW-cognate class signal peptide.
  
     0.692
SDH27725.1
SipW-cognate class signal peptide.
  
     0.676
SDH65750.1
LPXTG-motif cell wall anchor domain-containing protein/conserved repeat domain-containing protein.
  
     0.658
SDH38781.1
Subtilase family protein.
   
  0.635
SDH66282.1
RNA polymerase sigma factor, sigma-70 family; Belongs to the sigma-70 factor family. ECF subfamily.
  
 
  0.615
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
   
   0.579
SDH67309.1
Putative cell wall binding repeat 2.
   
  0.543
SDH77144.1
Putative cell wall binding repeat 2; Belongs to the peptidase S8 family.
   
  0.543
SDH36706.1
FHA domain-containing protein.
  
  0.523
Your Current Organism:
Agrococcus jejuensis
NCBI taxonomy Id: 399736
Other names: A. jejuensis, Agrococcus jejuensis Lee 2008, DSM 22002, JCM 14256, KCTC 19198, strain SSW1-48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.