STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH65834.1DNA-binding transcriptional regulator, AcrR family. (221 aa)    
Predicted Functional Partners:
SDH51566.1
Uncharacterized conserved protein YaeQ, suppresses RfaH defect.
  
    0.718
kduI
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family.
   
    0.676
SDH65867.1
Purine-cytosine permease; Belongs to the purine-cytosine permease (2.A.39) family.
       0.596
SDH65902.1
Hypothetical protein.
       0.574
SDH14471.1
Amidase.
  
     0.435
SDH50951.1
Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains.
  
     0.422
SDH25705.1
Hypothetical protein.
  
     0.419
SDH53307.1
Putative spermidine/putrescine transport system substrate-binding protein.
  
     0.409
Your Current Organism:
Agrococcus jejuensis
NCBI taxonomy Id: 399736
Other names: A. jejuensis, Agrococcus jejuensis Lee 2008, DSM 22002, JCM 14256, KCTC 19198, strain SSW1-48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.