Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SDH19451.1 | SDH25383.1 | SAMN04489720_0354 | SAMN04489720_0563 | Thioredoxin reductase. | L-threonine synthase; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine. | 0.506 |
| SDH19451.1 | SDH66375.1 | SAMN04489720_0354 | SAMN04489720_1935 | Thioredoxin reductase. | L-threonine aldolase. | 0.817 |
| SDH19451.1 | gcvP | SAMN04489720_0354 | SAMN04489720_2758 | Thioredoxin reductase. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.913 |
| SDH19451.1 | gcvT | SAMN04489720_0354 | SAMN04489720_2756 | Thioredoxin reductase. | Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine. | 0.835 |
| SDH19451.1 | glyA | SAMN04489720_0354 | SAMN04489720_0864 | Thioredoxin reductase. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.916 |
| SDH19451.1 | kbl | SAMN04489720_0354 | SAMN04489720_2048 | Thioredoxin reductase. | 2-amino-3-ketobutyrate coenzyme A ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA. | 0.850 |
| SDH25383.1 | SDH19451.1 | SAMN04489720_0563 | SAMN04489720_0354 | L-threonine synthase; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine. | Thioredoxin reductase. | 0.506 |
| SDH25383.1 | SDH66375.1 | SAMN04489720_0563 | SAMN04489720_1935 | L-threonine synthase; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine. | L-threonine aldolase. | 0.934 |
| SDH25383.1 | SDH84290.1 | SAMN04489720_0563 | SAMN04489720_2571 | L-threonine synthase; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine. | L-threonine ammonia-lyase. | 0.983 |
| SDH25383.1 | gcvP | SAMN04489720_0563 | SAMN04489720_2758 | L-threonine synthase; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.452 |
| SDH25383.1 | kbl | SAMN04489720_0563 | SAMN04489720_2048 | L-threonine synthase; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine. | 2-amino-3-ketobutyrate coenzyme A ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA. | 0.505 |
| SDH66375.1 | SDH19451.1 | SAMN04489720_1935 | SAMN04489720_0354 | L-threonine aldolase. | Thioredoxin reductase. | 0.817 |
| SDH66375.1 | SDH25383.1 | SAMN04489720_1935 | SAMN04489720_0563 | L-threonine aldolase. | L-threonine synthase; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine. | 0.934 |
| SDH66375.1 | SDH67121.1 | SAMN04489720_1935 | SAMN04489720_1963 | L-threonine aldolase. | Short chain dehydrogenase. | 0.653 |
| SDH66375.1 | SDH67339.1 | SAMN04489720_1935 | SAMN04489720_1971 | L-threonine aldolase. | Hypothetical protein. | 0.739 |
| SDH66375.1 | SDH84290.1 | SAMN04489720_1935 | SAMN04489720_2571 | L-threonine aldolase. | L-threonine ammonia-lyase. | 0.901 |
| SDH66375.1 | SDH93185.1 | SAMN04489720_1935 | SAMN04489720_2910 | L-threonine aldolase. | NADP-dependent 3-hydroxy acid dehydrogenase YdfG. | 0.866 |
| SDH66375.1 | gcvP | SAMN04489720_1935 | SAMN04489720_2758 | L-threonine aldolase. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.950 |
| SDH66375.1 | gcvT | SAMN04489720_1935 | SAMN04489720_2756 | L-threonine aldolase. | Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine. | 0.882 |
| SDH66375.1 | glyA | SAMN04489720_1935 | SAMN04489720_0864 | L-threonine aldolase. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.921 |
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