STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH66618.1Pilus assembly protein CpaF. (494 aa)    
Predicted Functional Partners:
SDH66648.1
Tight adherence protein B.
 
  
 0.972
SDH66675.1
Tight adherence protein C.
 
  
 0.968
SDH66593.1
Pilus assembly protein CpaE.
 
  
 0.962
SDH66570.1
Pilus assembly protein CpaB.
 
  
 0.920
SDH66517.1
TadE-like protein.
 
    0.914
SDH66541.1
Putative Flp pilus-assembly TadE/G-like.
 
    0.885
SDH66481.1
Pilus assembly protein Flp/PilA.
 
  
 0.753
SDH91978.1
Tight adherence protein C.
 
  
 0.751
SDH77714.1
Tight adherence protein B.
  
  
 0.605
SDH91953.1
Tight adherence protein B.
  
  
 0.505
Your Current Organism:
Agrococcus jejuensis
NCBI taxonomy Id: 399736
Other names: A. jejuensis, Agrococcus jejuensis Lee 2008, DSM 22002, JCM 14256, KCTC 19198, strain SSW1-48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.