STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH67510.1Hypothetical protein. (370 aa)    
Predicted Functional Partners:
SDH67477.1
Hypothetical protein.
 
     0.929
SDH80829.1
ABC-type transport system, involved in lipoprotein release, permease component.
 
  0.870
SDH22423.1
Putative ABC transport system permease protein.
  
 0.857
SDH15162.1
FtsX-like permease family protein.
  
  0.849
SDH22484.1
Hypothetical protein.
  
 
 0.786
SDH67417.1
Exodeoxyribonuclease-3.
       0.447
SDH67447.1
Hypothetical protein.
       0.447
SDH67390.1
LPXTG-motif cell wall anchor domain-containing protein.
 
     0.400
Your Current Organism:
Agrococcus jejuensis
NCBI taxonomy Id: 399736
Other names: A. jejuensis, Agrococcus jejuensis Lee 2008, DSM 22002, JCM 14256, KCTC 19198, strain SSW1-48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.