STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH71748.1VanZ like family protein. (169 aa)    
Predicted Functional Partners:
SDH12967.1
Hypothetical protein.
  
     0.714
SDH71772.1
Regulatory protein, tetR family.
       0.631
SDH16718.1
Phosphotransferase enzyme family protein.
  
    0.560
SDH23293.1
Uncharacterized conserved protein, contains ParB-like and HNH nuclease domains.
  
     0.552
SDH23675.1
Hypothetical protein.
  
     0.523
SDH23740.1
Hypothetical protein.
  
     0.518
SDH65449.1
Hypothetical protein.
  
     0.510
SDH42271.1
Phosphotransferase enzyme family protein.
  
     0.481
SDH47330.1
Predicted kinase.
  
     0.462
SDH68700.1
Hypothetical protein.
  
     0.459
Your Current Organism:
Agrococcus jejuensis
NCBI taxonomy Id: 399736
Other names: A. jejuensis, Agrococcus jejuensis Lee 2008, DSM 22002, JCM 14256, KCTC 19198, strain SSW1-48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.