STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH73916.1Broad specificity phosphatase PhoE. (214 aa)    
Predicted Functional Partners:
SDH73941.1
Thiol-disulfide isomerase or thioredoxin.
  
   0.989
SDH74008.1
Cytochrome c biogenesis protein.
 
    0.919
SDH73974.1
Cytochrome c-type biogenesis protein.
  
    0.885
hemL
Glutamate-1-semialdehyde 2,1-aminomutase.
  
    0.793
SDH12450.1
Protein of unknown function.
  
     0.763
SDH76886.1
Cystathionine beta-synthase.
   
  0.739
SDH69113.1
Hypothetical protein.
  
     0.729
SDH18632.1
MerR HTH family regulatory protein.
  
     0.721
SDH12996.1
Protein of unknown function.
  
     0.673
SDH55840.1
Predicted nucleic acid-binding protein, contains Zn-ribbon domain (includes truncated derivatives).
  
     0.659
Your Current Organism:
Agrococcus jejuensis
NCBI taxonomy Id: 399736
Other names: A. jejuensis, Agrococcus jejuensis Lee 2008, DSM 22002, JCM 14256, KCTC 19198, strain SSW1-48
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