STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH74156.1DNA-binding transcriptional regulator, FadR family. (243 aa)    
Predicted Functional Partners:
SDH74128.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
 
 
  0.923
SDH74058.1
Glutamine synthetase.
 
  
 0.920
SDH74087.1
Putative glutamine amidotransferase.
 
     0.805
SDH74116.1
Betaine-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
  
  0.798
SDH74041.1
Amino acid transporter.
 
     0.707
SDH74173.1
Cytochrome c-type biogenesis protein CcsB.
       0.603
SDH45598.1
DNA-binding transcriptional regulator, FadR family.
  
     0.540
SDH09697.1
DNA-binding transcriptional regulator, GntR family.
  
  
 0.516
SDH27881.1
DNA-binding transcriptional regulator, GntR family.
  
  
 0.483
SDH57150.1
DNA-binding transcriptional regulator, GntR family.
  
  
 0.475
Your Current Organism:
Agrococcus jejuensis
NCBI taxonomy Id: 399736
Other names: A. jejuensis, Agrococcus jejuensis Lee 2008, DSM 22002, JCM 14256, KCTC 19198, strain SSW1-48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.