STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH75444.1Hypothetical protein. (69 aa)    
Predicted Functional Partners:
SDH75362.1
Helix-turn-helix domain-containing protein.
       0.773
SDH75392.1
Hypothetical protein.
       0.773
SDH75413.1
Hypothetical protein.
       0.773
SDH75473.1
Hypothetical protein.
       0.773
SDH75507.1
Hypothetical protein.
       0.773
SDH75533.1
Hypothetical protein.
       0.773
SDH75312.1
Site-specific recombinase XerC; Belongs to the 'phage' integrase family.
       0.551
SDH75333.1
Helix-turn-helix.
       0.551
SDH75551.1
Phage major capsid protein, HK97 family.
       0.452
Your Current Organism:
Agrococcus jejuensis
NCBI taxonomy Id: 399736
Other names: A. jejuensis, Agrococcus jejuensis Lee 2008, DSM 22002, JCM 14256, KCTC 19198, strain SSW1-48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.