STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH75721.1Acyl dehydratase; Belongs to the UPF0336 family. (148 aa)    
Predicted Functional Partners:
SDH75741.1
Acyl dehydratase.
 
 
 0.999
murB
UDP-N-acetylmuramate dehydrogenase; Cell wall formation.
       0.836
SDH12153.1
3-hydroxyacyl-CoA dehydrogenase.
 
 0.775
SDH62122.1
Catalase; Belongs to the catalase family.
   
  0.612
SDH13860.1
[acyl-carrier-protein] S-malonyltransferase.
  
  
 0.599
SDH75777.1
Uncharacterized conserved protein YndB, AHSA1/START domain.
       0.592
SDH90165.1
Sec-independent protein translocase protein TatB.
  
     0.560
SDH13833.1
PucR C-terminal helix-turn-helix domain-containing protein.
  
     0.491
SDH14379.1
Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
  0.484
SDI02321.1
Predicted ATP-dependent carboligase, ATP-grasp superfamily; Manually curated.
  
     0.484
Your Current Organism:
Agrococcus jejuensis
NCBI taxonomy Id: 399736
Other names: A. jejuensis, Agrococcus jejuensis Lee 2008, DSM 22002, JCM 14256, KCTC 19198, strain SSW1-48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.