STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH77556.1Predicted phosphohydrolase, MPP superfamily. (307 aa)    
Predicted Functional Partners:
SDH77575.1
Membrane carboxypeptidase (penicillin-binding protein).
       0.721
SDH13974.1
Protein of unknown function.
  
     0.710
SDH77608.1
Hypothetical protein.
 
     0.668
SDH84019.1
Cell division protein FtsB.
 
     0.665
SDH12074.1
Protein of unknown function.
  
     0.617
SDH77634.1
Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family.
       0.609
SDH12450.1
Protein of unknown function.
  
     0.585
SDH73916.1
Broad specificity phosphatase PhoE.
  
     0.560
whiA
Hypothetical protein; Involved in cell division and chromosome segregation.
  
     0.554
SDH55840.1
Predicted nucleic acid-binding protein, contains Zn-ribbon domain (includes truncated derivatives).
  
     0.552
Your Current Organism:
Agrococcus jejuensis
NCBI taxonomy Id: 399736
Other names: A. jejuensis, Agrococcus jejuensis Lee 2008, DSM 22002, JCM 14256, KCTC 19198, strain SSW1-48
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