STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH79739.1Transcriptional regulator, GntR family. (244 aa)    
Predicted Functional Partners:
SDH79769.1
2-oxoisovalerate dehydrogenase E1 component.
 
    0.574
SDH45598.1
DNA-binding transcriptional regulator, FadR family.
  
    0.515
SDH90370.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
   
    0.489
SDH30820.1
PTS system, sucrose-specific IIC component.
  
 
 0.479
SDH54602.1
PTS system N-acetylglucosamine-specific IIA component, Glc family /PTS system N-acetylglucosamine-specific IIB component, Glc family.
  
 
 0.479
SDH79801.1
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase).
       0.455
SDI01413.1
Hypothetical protein.
  
    0.422
SDH86086.1
DNA-binding transcriptional regulator, MerR family.
   
    0.420
SDH74156.1
DNA-binding transcriptional regulator, FadR family.
  
    0.407
SDH30758.1
N-acetylglucosamine 6-phosphate deacetylase.
 
    0.400
Your Current Organism:
Agrococcus jejuensis
NCBI taxonomy Id: 399736
Other names: A. jejuensis, Agrococcus jejuensis Lee 2008, DSM 22002, JCM 14256, KCTC 19198, strain SSW1-48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.