STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH80392.1Two-component system, OmpR family, sensor histidine kinase VanS. (366 aa)    
Predicted Functional Partners:
SDH80427.1
Two-component system, OmpR family, response regulator VanR.
 
 0.990
SDH46782.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 
 0.934
SDH76294.1
Two-component system, OmpR family, response regulator.
 
 0.927
SDH54698.1
Two component transcriptional regulator, winged helix family.
 
 0.925
SDH30008.1
Two-component system, OmpR family, response regulator.
 
 0.924
SDH28741.1
Two-component system, OmpR family, response regulator MtrA.
 
 0.919
SDH67196.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 
 0.909
SDH64498.1
Adenylate cyclase, class 3.
   
 0.899
SDH80458.1
D-alanyl-D-alanine carboxypeptidase.
 
     0.882
SDI01796.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 
 0.881
Your Current Organism:
Agrococcus jejuensis
NCBI taxonomy Id: 399736
Other names: A. jejuensis, Agrococcus jejuensis Lee 2008, DSM 22002, JCM 14256, KCTC 19198, strain SSW1-48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.