STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH80928.1Dihydrolipoamide dehydrogenase. (475 aa)    
Predicted Functional Partners:
SDH92941.1
2-oxoglutarate dehydrogenase E1 component.
 
 0.998
SDH79769.1
2-oxoisovalerate dehydrogenase E1 component.
  
 0.984
SDH12938.1
2-oxoglutarate dehydrogenase E2 component.
 
 0.935
SDH10259.1
Glutamate synthase (NADH) large subunit.
    
 0.926
SDH30209.1
Pyruvate dehydrogenase E1 component beta subunit.
  
  0.880
SDH52671.1
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase).
 
  0.874
SDH99168.1
Pyruvate dehydrogenase E1 component beta subunit.
  
  0.872
SDH99195.1
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase).
 
  0.872
SDH52700.1
Pyruvate dehydrogenase E1 component beta subunit.
  
  0.871
SDH30199.1
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase).
 
  0.866
Your Current Organism:
Agrococcus jejuensis
NCBI taxonomy Id: 399736
Other names: A. jejuensis, Agrococcus jejuensis Lee 2008, DSM 22002, JCM 14256, KCTC 19198, strain SSW1-48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.