STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH82191.1Glycosyl transferase family 2. (407 aa)    
Predicted Functional Partners:
SDH82233.1
Glycosyltransferase, GT2 family.
 
 
  0.753
SDH81641.1
Rhamnosyltransferase.
 
    0.702
SDH82049.1
Rhamnosyltransferase.
 
    0.692
SDH82622.1
Hypothetical protein.
  
     0.671
SDH23675.1
Hypothetical protein.
  
     0.666
SDH82268.1
Hypothetical protein.
 
    0.631
whiB
Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA.
       0.566
SDH36918.1
Hypothetical protein.
  
     0.549
SDH33527.1
Hypothetical protein.
  
     0.523
SDI01639.1
Diacylglycerol kinase family enzyme.
    
  0.506
Your Current Organism:
Agrococcus jejuensis
NCBI taxonomy Id: 399736
Other names: A. jejuensis, Agrococcus jejuensis Lee 2008, DSM 22002, JCM 14256, KCTC 19198, strain SSW1-48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.