Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SDH10626.1 | SDH82717.1 | SAMN04489720_0055 | SAMN04489720_2520 | 16S rRNA (cytosine967-C5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 23S rRNA m(5)U-747 methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | 0.491 |
| SDH44991.1 | SDH82717.1 | SAMN04489720_1296 | SAMN04489720_2520 | Uncharacterized protein. | 23S rRNA m(5)U-747 methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | 0.488 |
| SDH75953.1 | SDH82717.1 | SAMN04489720_2286 | SAMN04489720_2520 | Sec-independent protein translocase protein TatB. | 23S rRNA m(5)U-747 methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | 0.504 |
| SDH75953.1 | SDH90889.1 | SAMN04489720_2286 | SAMN04489720_2812 | Sec-independent protein translocase protein TatB. | Phosphotransferase enzyme family protein. | 0.728 |
| SDH82690.1 | SDH82717.1 | SAMN04489720_2519 | SAMN04489720_2520 | Hypothetical protein. | 23S rRNA m(5)U-747 methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | 0.773 |
| SDH82690.1 | SDH82750.1 | SAMN04489720_2519 | SAMN04489720_2521 | Hypothetical protein. | Amino acid/polyamine/organocation transporter, APC superfamily. | 0.566 |
| SDH82690.1 | glmU | SAMN04489720_2519 | SAMN04489720_2517 | Hypothetical protein. | UDP-N-acetylglucosamine pyrophosphorylase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. | 0.623 |
| SDH82690.1 | prs | SAMN04489720_2519 | SAMN04489720_2518 | Hypothetical protein. | Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily. | 0.623 |
| SDH82717.1 | SDH10626.1 | SAMN04489720_2520 | SAMN04489720_0055 | 23S rRNA m(5)U-747 methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | 16S rRNA (cytosine967-C5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.491 |
| SDH82717.1 | SDH44991.1 | SAMN04489720_2520 | SAMN04489720_1296 | 23S rRNA m(5)U-747 methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | Uncharacterized protein. | 0.488 |
| SDH82717.1 | SDH75953.1 | SAMN04489720_2520 | SAMN04489720_2286 | 23S rRNA m(5)U-747 methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | Sec-independent protein translocase protein TatB. | 0.504 |
| SDH82717.1 | SDH82690.1 | SAMN04489720_2520 | SAMN04489720_2519 | 23S rRNA m(5)U-747 methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | Hypothetical protein. | 0.773 |
| SDH82717.1 | SDH82750.1 | SAMN04489720_2520 | SAMN04489720_2521 | 23S rRNA m(5)U-747 methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | Amino acid/polyamine/organocation transporter, APC superfamily. | 0.566 |
| SDH82717.1 | SDH90889.1 | SAMN04489720_2520 | SAMN04489720_2812 | 23S rRNA m(5)U-747 methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | Phosphotransferase enzyme family protein. | 0.414 |
| SDH82717.1 | SDH91113.1 | SAMN04489720_2520 | SAMN04489720_2822 | 23S rRNA m(5)U-747 methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | Carbonic anhydrase. | 0.414 |
| SDH82717.1 | SDI02272.1 | SAMN04489720_2520 | SAMN04489720_3236 | 23S rRNA m(5)U-747 methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | tRNA (adenine-58-N(1)-) methyltransferase. | 0.691 |
| SDH82717.1 | glmU | SAMN04489720_2520 | SAMN04489720_2517 | 23S rRNA m(5)U-747 methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | UDP-N-acetylglucosamine pyrophosphorylase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. | 0.643 |
| SDH82717.1 | prs | SAMN04489720_2520 | SAMN04489720_2518 | 23S rRNA m(5)U-747 methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily. | 0.657 |
| SDH82750.1 | SDH82690.1 | SAMN04489720_2521 | SAMN04489720_2519 | Amino acid/polyamine/organocation transporter, APC superfamily. | Hypothetical protein. | 0.566 |
| SDH82750.1 | SDH82717.1 | SAMN04489720_2521 | SAMN04489720_2520 | Amino acid/polyamine/organocation transporter, APC superfamily. | 23S rRNA m(5)U-747 methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | 0.566 |
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