STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH83871.1Hypothetical protein. (232 aa)    
Predicted Functional Partners:
rpmJ-2
LSU ribosomal protein L36P; Belongs to the bacterial ribosomal protein bL36 family.
 
    0.658
SDH20315.1
Amino acid adenylation domain-containing protein.
   
 0.575
SDH23675.1
Hypothetical protein.
  
     0.548
SDH83847.1
HNH endonuclease.
       0.496
SDH87266.1
Non-ribosomal peptide synthetase terminal domain of unknown function.
   
  0.477
SDH23740.1
Hypothetical protein.
  
     0.465
SDH68700.1
Hypothetical protein.
  
     0.449
SDH83916.1
Cobalamin synthesis protein cobW C-terminal domain-containing protein.
       0.437
SDH12967.1
Hypothetical protein.
  
    0.430
SDH23698.1
Ca-activated chloride channel family protein.
  
     0.425
Your Current Organism:
Agrococcus jejuensis
NCBI taxonomy Id: 399736
Other names: A. jejuensis, Agrococcus jejuensis Lee 2008, DSM 22002, JCM 14256, KCTC 19198, strain SSW1-48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.