SDH83916.1 protein (Agrococcus jejuensis) - STRING interaction network

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Score

SDH83916.1

Cobalamin synthesis protein cobW C-terminal domain-containing protein. (316 aa)

Predicted Functional Partners:

SDH51952.1

0.792

rpsN

0.773

SDH88504.1

0.740

rpmB

0.737

map

0.729

map-2

0.729

map-3

0.729

rpmJ-2

0.702

rpmG

0.635

SDH28364.1

0.555

Your Current Organism:

Agrococcus jejuensis

NCBI taxonomy Id: 399736
Other names: A. jejuensis, Agrococcus jejuensis Lee 2008, DSM 22002, JCM 14256, KCTC 19198, strain SSW1-48

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SDH28364.1	SDH83916.1	SAMN04489720_0672	SAMN04489720_2557	Uncharacterized short protein YbdD, DUF466 family.	Cobalamin synthesis protein cobW C-terminal domain-containing protein.	0.555
SDH51952.1	SDH83916.1	SAMN04489720_1495	SAMN04489720_2557	Zinc/manganese transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family.	Cobalamin synthesis protein cobW C-terminal domain-containing protein.	0.792
SDH51952.1	map-3	SAMN04489720_1495	SAMN04489720_1490	Zinc/manganese transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family.	Methionyl aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.	0.574
SDH51952.1	rpmB	SAMN04489720_1495	SAMN04489720_1488	Zinc/manganese transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family.	LSU ribosomal protein L28P; Belongs to the bacterial ribosomal protein bL28 family.	0.841
SDH51952.1	rpmG	SAMN04489720_1495	SAMN04489720_1487	Zinc/manganese transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family.	LSU ribosomal protein L33P; Belongs to the bacterial ribosomal protein bL33 family.	0.416
SDH51952.1	rpsN	SAMN04489720_1495	SAMN04489720_1486	Zinc/manganese transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family.	SSU ribosomal protein S14P; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.	0.806
SDH83916.1	SDH28364.1	SAMN04489720_2557	SAMN04489720_0672	Cobalamin synthesis protein cobW C-terminal domain-containing protein.	Uncharacterized short protein YbdD, DUF466 family.	0.555
SDH83916.1	SDH51952.1	SAMN04489720_2557	SAMN04489720_1495	Cobalamin synthesis protein cobW C-terminal domain-containing protein.	Zinc/manganese transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family.	0.792
SDH83916.1	SDH88504.1	SAMN04489720_2557	SAMN04489720_2726	Cobalamin synthesis protein cobW C-terminal domain-containing protein.	RNA polymerase-binding transcription factor DksA.	0.740
SDH83916.1	map	SAMN04489720_2557	SAMN04489720_0154	Cobalamin synthesis protein cobW C-terminal domain-containing protein.	Methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.	0.729
SDH83916.1	map-2	SAMN04489720_2557	SAMN04489720_0997	Cobalamin synthesis protein cobW C-terminal domain-containing protein.	Methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.	0.729
SDH83916.1	map-3	SAMN04489720_2557	SAMN04489720_1490	Cobalamin synthesis protein cobW C-terminal domain-containing protein.	Methionyl aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.	0.729
SDH83916.1	rpmB	SAMN04489720_2557	SAMN04489720_1488	Cobalamin synthesis protein cobW C-terminal domain-containing protein.	LSU ribosomal protein L28P; Belongs to the bacterial ribosomal protein bL28 family.	0.737
SDH83916.1	rpmG	SAMN04489720_2557	SAMN04489720_1487	Cobalamin synthesis protein cobW C-terminal domain-containing protein.	LSU ribosomal protein L33P; Belongs to the bacterial ribosomal protein bL33 family.	0.635
SDH83916.1	rpmJ-2	SAMN04489720_2557	SAMN04489720_2556	Cobalamin synthesis protein cobW C-terminal domain-containing protein.	LSU ribosomal protein L36P; Belongs to the bacterial ribosomal protein bL36 family.	0.702
SDH83916.1	rpsN	SAMN04489720_2557	SAMN04489720_1486	Cobalamin synthesis protein cobW C-terminal domain-containing protein.	SSU ribosomal protein S14P; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.	0.773
SDH88504.1	SDH83916.1	SAMN04489720_2726	SAMN04489720_2557	RNA polymerase-binding transcription factor DksA.	Cobalamin synthesis protein cobW C-terminal domain-containing protein.	0.740
map	SDH83916.1	SAMN04489720_0154	SAMN04489720_2557	Methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.	Cobalamin synthesis protein cobW C-terminal domain-containing protein.	0.729
map	rpmJ-2	SAMN04489720_0154	SAMN04489720_2556	Methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.	LSU ribosomal protein L36P; Belongs to the bacterial ribosomal protein bL36 family.	0.677
map	rpsN	SAMN04489720_0154	SAMN04489720_1486	Methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.	SSU ribosomal protein S14P; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.	0.921