SDH88559.1 protein (Agrococcus jejuensis) - STRING interaction network

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Score

SDH88559.1

RNA polymerase sigma-70 factor, ECF subfamily. (192 aa)

Predicted Functional Partners:

SDH88532.1

0.994

rpoC

0.894

rpoB

0.894

rpoZ

0.812

rpoA

0.812

SDH92769.1

0.805

SDH59704.1

0.758

SDH39015.1

0.738

SDH88504.1

0.655

SDH88583.1

0.608

Your Current Organism:

Agrococcus jejuensis

NCBI taxonomy Id: 399736
Other names: A. jejuensis, Agrococcus jejuensis Lee 2008, DSM 22002, JCM 14256, KCTC 19198, strain SSW1-48

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SDH39015.1	SDH59704.1	SAMN04489720_1123	SAMN04489720_1731	RNA polymerase sigma-70 factor, ECF subfamily.	RNA polymerase, sigma subunit, ECF family; Belongs to the sigma-70 factor family. ECF subfamily.	0.726
SDH39015.1	SDH88532.1	SAMN04489720_1123	SAMN04489720_2727	RNA polymerase sigma-70 factor, ECF subfamily.	Hypothetical protein.	0.583
SDH39015.1	SDH88559.1	SAMN04489720_1123	SAMN04489720_2728	RNA polymerase sigma-70 factor, ECF subfamily.	RNA polymerase sigma-70 factor, ECF subfamily.	0.738
SDH39015.1	rpoA	SAMN04489720_1123	SAMN04489720_0977	RNA polymerase sigma-70 factor, ECF subfamily.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.700
SDH39015.1	rpoB	SAMN04489720_1123	SAMN04489720_1064	RNA polymerase sigma-70 factor, ECF subfamily.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.720
SDH39015.1	rpoC	SAMN04489720_1123	SAMN04489720_1063	RNA polymerase sigma-70 factor, ECF subfamily.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.725
SDH39015.1	rpoZ	SAMN04489720_1123	SAMN04489720_0060	RNA polymerase sigma-70 factor, ECF subfamily.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.700
SDH59704.1	SDH39015.1	SAMN04489720_1731	SAMN04489720_1123	RNA polymerase, sigma subunit, ECF family; Belongs to the sigma-70 factor family. ECF subfamily.	RNA polymerase sigma-70 factor, ECF subfamily.	0.726
SDH59704.1	SDH88532.1	SAMN04489720_1731	SAMN04489720_2727	RNA polymerase, sigma subunit, ECF family; Belongs to the sigma-70 factor family. ECF subfamily.	Hypothetical protein.	0.583
SDH59704.1	SDH88559.1	SAMN04489720_1731	SAMN04489720_2728	RNA polymerase, sigma subunit, ECF family; Belongs to the sigma-70 factor family. ECF subfamily.	RNA polymerase sigma-70 factor, ECF subfamily.	0.758
SDH59704.1	SDH92769.1	SAMN04489720_1731	SAMN04489720_2893	RNA polymerase, sigma subunit, ECF family; Belongs to the sigma-70 factor family. ECF subfamily.	RNA polymerase, sigma subunit, ECF family; Belongs to the sigma-70 factor family. ECF subfamily.	0.761
SDH59704.1	rpoA	SAMN04489720_1731	SAMN04489720_0977	RNA polymerase, sigma subunit, ECF family; Belongs to the sigma-70 factor family. ECF subfamily.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.700
SDH59704.1	rpoB	SAMN04489720_1731	SAMN04489720_1064	RNA polymerase, sigma subunit, ECF family; Belongs to the sigma-70 factor family. ECF subfamily.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.720
SDH59704.1	rpoC	SAMN04489720_1731	SAMN04489720_1063	RNA polymerase, sigma subunit, ECF family; Belongs to the sigma-70 factor family. ECF subfamily.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.725
SDH59704.1	rpoZ	SAMN04489720_1731	SAMN04489720_0060	RNA polymerase, sigma subunit, ECF family; Belongs to the sigma-70 factor family. ECF subfamily.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.700
SDH88504.1	SDH88532.1	SAMN04489720_2726	SAMN04489720_2727	RNA polymerase-binding transcription factor DksA.	Hypothetical protein.	0.655
SDH88504.1	SDH88559.1	SAMN04489720_2726	SAMN04489720_2728	RNA polymerase-binding transcription factor DksA.	RNA polymerase sigma-70 factor, ECF subfamily.	0.655
SDH88504.1	SDH88583.1	SAMN04489720_2726	SAMN04489720_2729	RNA polymerase-binding transcription factor DksA.	CHRD domain-containing protein.	0.441
SDH88504.1	rpoA	SAMN04489720_2726	SAMN04489720_0977	RNA polymerase-binding transcription factor DksA.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.783
SDH88504.1	rpoB	SAMN04489720_2726	SAMN04489720_1064	RNA polymerase-binding transcription factor DksA.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.870