Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SDH10235.1 | SDH31114.1 | SAMN04489720_0041 | SAMN04489720_0908 | Glutamate synthase (NADH) small subunit. | Isocitrate dehydrogenase; Belongs to the monomeric-type IDH family. | 0.880 |
| SDH10235.1 | SDH89778.1 | SAMN04489720_0041 | SAMN04489720_2772 | Glutamate synthase (NADH) small subunit. | NAD-dependent dihydropyrimidine dehydrogenase, PreA subunit; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | 0.677 |
| SDH10235.1 | SDH89834.1 | SAMN04489720_0041 | SAMN04489720_2774 | Glutamate synthase (NADH) small subunit. | Citrate synthase; Belongs to the citrate synthase family. | 0.806 |
| SDH10235.1 | SDH92941.1 | SAMN04489720_0041 | SAMN04489720_2900 | Glutamate synthase (NADH) small subunit. | 2-oxoglutarate dehydrogenase E1 component. | 0.886 |
| SDH14962.1 | SDH89778.1 | SAMN04489720_0216 | SAMN04489720_2772 | Putative TIM-barrel protein, nifR3 family; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | NAD-dependent dihydropyrimidine dehydrogenase, PreA subunit; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | 0.675 |
| SDH31114.1 | SDH10235.1 | SAMN04489720_0908 | SAMN04489720_0041 | Isocitrate dehydrogenase; Belongs to the monomeric-type IDH family. | Glutamate synthase (NADH) small subunit. | 0.880 |
| SDH31114.1 | SDH77176.1 | SAMN04489720_0908 | SAMN04489720_2332 | Isocitrate dehydrogenase; Belongs to the monomeric-type IDH family. | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | 0.413 |
| SDH31114.1 | SDH89778.1 | SAMN04489720_0908 | SAMN04489720_2772 | Isocitrate dehydrogenase; Belongs to the monomeric-type IDH family. | NAD-dependent dihydropyrimidine dehydrogenase, PreA subunit; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | 0.923 |
| SDH31114.1 | SDH89834.1 | SAMN04489720_0908 | SAMN04489720_2774 | Isocitrate dehydrogenase; Belongs to the monomeric-type IDH family. | Citrate synthase; Belongs to the citrate synthase family. | 0.560 |
| SDH31114.1 | SDH92941.1 | SAMN04489720_0908 | SAMN04489720_2900 | Isocitrate dehydrogenase; Belongs to the monomeric-type IDH family. | 2-oxoglutarate dehydrogenase E1 component. | 0.919 |
| SDH43621.1 | SDH89778.1 | SAMN04489720_1256 | SAMN04489720_2772 | Cytochrome P450. | NAD-dependent dihydropyrimidine dehydrogenase, PreA subunit; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | 0.763 |
| SDH43621.1 | SDH92941.1 | SAMN04489720_1256 | SAMN04489720_2900 | Cytochrome P450. | 2-oxoglutarate dehydrogenase E1 component. | 0.736 |
| SDH74769.1 | SDH89778.1 | SAMN04489720_2238 | SAMN04489720_2772 | ferredoxin--NADP+ reductase. | NAD-dependent dihydropyrimidine dehydrogenase, PreA subunit; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | 0.763 |
| SDH74769.1 | SDH92941.1 | SAMN04489720_2238 | SAMN04489720_2900 | ferredoxin--NADP+ reductase. | 2-oxoglutarate dehydrogenase E1 component. | 0.736 |
| SDH77176.1 | SDH31114.1 | SAMN04489720_2332 | SAMN04489720_0908 | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | Isocitrate dehydrogenase; Belongs to the monomeric-type IDH family. | 0.413 |
| SDH77176.1 | SDH79769.1 | SAMN04489720_2332 | SAMN04489720_2423 | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | 2-oxoisovalerate dehydrogenase E1 component. | 0.970 |
| SDH77176.1 | SDH89778.1 | SAMN04489720_2332 | SAMN04489720_2772 | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | NAD-dependent dihydropyrimidine dehydrogenase, PreA subunit; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | 0.912 |
| SDH77176.1 | SDH89834.1 | SAMN04489720_2332 | SAMN04489720_2774 | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | Citrate synthase; Belongs to the citrate synthase family. | 0.922 |
| SDH77176.1 | SDH92941.1 | SAMN04489720_2332 | SAMN04489720_2900 | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | 2-oxoglutarate dehydrogenase E1 component. | 0.949 |
| SDH79769.1 | SDH77176.1 | SAMN04489720_2423 | SAMN04489720_2332 | 2-oxoisovalerate dehydrogenase E1 component. | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | 0.970 |
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